Arne O Smalås: search on Z-Library

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1

Predicting proteinase specificities from free energy calculations

Seble Merid Mekonnen, Magne Olufsen, Arne O. Smalås, Bjørn O. Brandsdal

Journal:

Journal of Molecular Graphics and Modelling

Year:

2006

Language:

english

File:

PDF, 333 KB

english, 2006

2

The trade-off between fecundity and egg size in a polymorphic population of Arctic charr ( Salvelinus alpinus (L.)) in Skogsfjordvatn, subarctic Norway

Smalås, Aslak, Amundsen, Per-Arne, Knudsen, Rune

Journal:

Ecology and Evolution

Year:

2017

Language:

english

File:

PDF, 343 KB

english, 2017

3

Comparative unfolding studies of psychrophilic and mesophilic uracil DNA glycosylase: MD simulations show reduced thermal stability of the cold-adapted enzyme

Magne Olufsen, Bjørn Olav Brandsdal, Arne Oskar Smalås

Journal:

Journal of Molecular Graphics and Modelling

Year:

2007

Language:

english

File:

PDF, 2.08 MB

english, 2007

4

Electrostatics of mesophilic and psychrophilic trypsin isoenzymes: Qualitative evaluation of electrostatic differences at the substrate binding site

Alemayehu A. Gorfe, Bjørn O. Brandsdal, Hanna-Kirsti S. Leiros, Ronny Helland, Arne O. Smalås

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2000

Language:

english

File:

PDF, 1.32 MB

english, 2000

5

Electrostatic effects play a central role in cold adaptation of trypsin

Bjørn Olav Brandsdal, Arne O. Smalås, Johan Åqvist

Journal:

Year:

2001

Language:

english

File:

PDF, 93 KB

english, 2001

6

Structural and biophysical analysis of interactions between cod and human uracil-DNA N -glycosylase (UNG) and UNG inhibitor (Ugi)

Assefa, Netsanet Gizaw, Niiranen, Laila, Johnson, Kenneth A., Leiros, Hanna-Kirsti Schrøder, Smalås, Arne Oskar, Willassen, Nils Peder, Moe, Elin

Journal:

Acta Crystallographica Section D Biological Crystallography

Year:

2014

Language:

english

File:

PDF, 730 KB

english, 2014

7

Sequence comparison and environmental adaptation of a bacterial endonuclease

Bjørn Altermark, Steinar Thorvaldsen, Elin Moe, Arne O. Smalås, Nils P. Willassen

Journal:

Computational Biology and Chemistry

Year:

2007

Language:

english

File:

PDF, 481 KB

english, 2007

8

Ion pairs and their role in modulating stability of cold- and warm-active uracil DNA glycosylase

Magne Olufsen, Elena Papaleo, Arne Oskar Smalås, Bjørn Olav Brandsdal

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2008

Language:

english

File:

PDF, 308 KB

english, 2008

9

The primary structure and specificity determining residues displayed by recombinant salmon antibody domains

Stein Tore Solem, Bjørn O. Brandsdal, Arne Smalås, Trond Ø. Jørgensen

Journal:

Molecular Immunology

Year:

2004

Language:

english

File:

PDF, 548 KB

english, 2004

10

Thermodynamics and structure of a salmon cold active goose-type lysozyme

Peter Kyomuhendo, Bjørnar Myrnes, Bjørn-Olav Brandsdal, Arne O. Smalås, Inge W. Nilsen, Ronny Helland

Journal:

Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology

Year:

2010

Language:

english

File:

PDF, 1.83 MB

english, 2010

11

Crystal Structures of Five Bovine Chymotrypsin Complexes with P1 BPTI Variants

Honorata Czapinska, Ronny Helland, Arne O. Smalås, Jacek Otlewski

Journal:

Journal of Molecular Biology

Year:

2004

Language:

english

File:

PDF, 1.21 MB

english, 2004

12

Time-Resolved Macromolecular Crystallography || Laue Diffraction as a Tool in Dynamic Studies: Hydrolysis of a Transiently Stable Intermediate in Catalysis by Trypsin

Paul T. Singer, Robert P. Carty, Lonny E. Berman, Ilme Schlichting, Ann Stock, Arne Smalas, Zhouping Cai, Walter F. Mangel, Keith W. Jones and Robert M. Sweet

Journal:

Philosophical Transactions of the Royal Society Physical and Engineering Sciences (1990-1995)

Year:

1992

Language:

english

File:

PDF, 2.50 MB

english, 1992

13

Structural and functional characterization of two unusual endonuclease III enzymes from Deinococcus radiodurans

Sarre, Aili, Ökvist, Mats, Klar, Tobias, Hall, David R., Smalås, Arne O., McSweeney, Sean, Timmins, Joanna, Moe, Elin

Journal:

Journal of Structural Biology

Year:

2015

Language:

english

File:

PDF, 3.31 MB

english, 2015

14

Electrostatic interactions play an essential role in DNA repair and cold-adaptation of Uracil DNA glycosylase

Magne Olufsen, Arne O. Smalås, Bjørn O. Brandsdal

Journal:

Journal of Molecular Modeling

Year:

2008

Language:

english

File:

PDF, 540 KB

english, 2008

15

Characterization of the N-acetylneuraminic acid synthase (NeuB) from the psychrophilic fish pathogen Moritella viscosa

Berg, Tor Olav, Gurung, Man Kumari, Altermark, Bjørn, Smalås, Arne O., Ræder, Inger Lin U.

Journal:

Carbohydrate Research

Year:

2015

Language:

english

File:

PDF, 2.28 MB

english, 2015

16

Climate warming is predicted to enhance the negative effects of harvesting on high‐latitude lake fish

Smalås, Aslak, Strøm, John F., Amundsen, Per‐Arne, Dieckmann, Ulf, Primicerio, Raul, Heino, Jani

Journal:

Journal of Applied Ecology

Year:

2019

Language:

english

File:

PDF, 1.41 MB

english, 2019

17

The crystal structure of anionic salmon trypsin in complex with bovine pancreatic trypsin inhibitor

Ronny Helland, Ingar Leiros, Gunnar I. Berglund, Nils P. Willassen, Arne O. Smalås

Journal:

Year:

1998

Language:

english

File:

PDF, 609 KB

english, 1998

18

Trypsin specificity as elucidated by LIE calculations, X-ray structures, and association constant measurements

Hanna-Kirsti Schrøder Leiros, Bjørn Olav Brandsdal, Ole Andreas Andersen, Vibeke Os, Ingar Leiros, Ronny Helland, Jacek Otlewski, Nils Peder Willassen, Arne O. Smalås

Journal:

Protein Science

Year:

2004

Language:

english

File:

PDF, 831 KB

english, 2004

19

Substitutions at the P1′ position in BPTI strongly affect the association energy with serine proteinases

Agnieszka Grzesiak, Ronny Helland, Arne O Smalås, Daniel Krowarsch, Michal Dadlez, Jacek Otlewski

Journal:

Journal of Molecular Biology

Year:

2000

Language:

english

File:

PDF, 556 KB

english, 2000

20

Long-term ecological studies in northern lakes-challenges, experiences, and accomplishments

Amundsen, Per-Arne, Primicerio, Raul, Smalås, Aslak, Henriksen, Eirik H., Knudsen, Rune, Kristoffersen, Roar, Klemetsen, Anders

Journal:

Limnology and Oceanography

Year:

2018

Language:

english

File:

PDF, 459 KB

english, 2018

21

Climate warming is predicted to enhance the negative effects of harvesting on high‐latitude lake fish

Smalås, Aslak, Strøm, John F., Amundsen, Per‐Arne, Dieckmann, Ulf, Primicerio, Raul, Heino, Jani

Journal:

Journal of Applied Ecology

Year:

2019

File:

PDF, 1.41 MB

2019

22

Structural comparison of psychrophilic and mesophilic trypsins : Elucidating the molecular basis of cold-adaptation

Hanna-Kirsti Schrøder Leiros, Nils P. Willassen, Arne O. Smalås

Journal:

Year:

2000

Language:

english

File:

PDF, 1.06 MB

english, 2000

23

Temperature and pH sensitivity of trypsins from atlantic salmon (Salmo salar) in comparison with bovine and porcine trypsin

Heidi Outzen, Gunnar I. Berglund, Arne O. Smalås, Nils P. Willassen

Journal:

Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology

Year:

1996

Language:

english

File:

PDF, 1.13 MB

english, 1996

24

The antibody site in Atlantic salmon; phage display and modeling of scFv with anti-hapten binding ability.

Trond Ø. Jørgensen, Stein Tore Solem, Sigrun Espelid, Greg W. Warr, Bjørn Olav Brandsdal, Arne Smalås

Journal:

Developmental & Comparative Immunology

Year:

2002

Language:

english

File:

PDF, 285 KB

english, 2002

25

Free energy calculations show that acidic P1 variants undergo large pKa shifts upon binding to trypsin

Bjørn O. Brandsdal, Arne O. Smalås, Johan Åqvist

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2006

Language:

english

File:

PDF, 281 KB

english, 2006

26

Computational analysis of binding of P1 variants to trypsin

Bjørn O. Brandsdal, Johan Åqvist, Arne O. Smalås

Journal:

Protein Science

Year:

2001

Language:

english

File:

PDF, 437 KB

english, 2001

27

Probing the Effect of Point Mutations at Protein-Protein Interfaces with Free Energy Calculations

Almlöf, Martin, Åqvist, Johan, Smalås, Arne O., Brandsdal, Bjørn O.

Journal:

Biophysical Journal

Year:

2006

Language:

english

File:

PDF, 450 KB

english, 2006

28

Isolation and complete genome sequence of the thermophilic Geobacillus sp. 12AMOR1 from an Arctic deep-sea hydrothermal vent site

Wissuwa, Juliane, Stokke, Runar, Fedøy, Anita-Elin, Lian, Kjersti, Smalås, Arne Oskar, Steen, Ida Helene

Journal:

Standards in Genomic Sciences

Year:

2016

Language:

english

File:

PDF, 1.61 MB

english, 2016

29

Structural evidence for lack of inhibition of fish goose-type lysozymes by a bacterial inhibitor of lysozyme

Peter Kyomuhendo, Inge W. Nilsen, Bjørn Olav Brandsdal, Arne O. Smalås

Journal:

Journal of Molecular Modeling

Year:

2008

Language:

english

File:

PDF, 859 KB

english, 2008

30

The 1.8 Å crystal structure of a proteinase K-like enzyme from a psychrotroph Serratia species

Ronny Helland, Atle Noralf Larsen, Arne Oskar Smalås, Nils Peder Willassen

Journal:

Year:

2006

Language:

english

File:

PDF, 891 KB

english, 2006

31

Structural Consequences of Accommodation of Four Non-cognate Amino Acid Residues in the S1 Pocket of Bovine Trypsin and Chymotrypsin

Ronny Helland, Honorata Czapinska, Ingar Leiros, Magne Olufsen, Jacek Otlewski, Arne O Smalås

Journal:

Journal of Molecular Biology

Year:

2003

Language:

english

File:

PDF, 3.87 MB

english, 2003

32

Effect of fish skin mucus on the soluble proteome of Vibrio salmonicida analysed by 2-D gel electrophoresis and tandem mass spectrometry

Inger Lin Uttakleiv Ræder, Steinar M. Paulsen, Arne O. Smalås, Nils Peder Willassen

Journal:

Microbial Pathogenesis

Year:

2007

Language:

english

File:

PDF, 344 KB

english, 2007

33

Comparative molecular dynamics simulation studies of salmon and bovine trypsins in aqueous solution

Heimstad, Eldbjørg S., Hansen, Lars K., Smalås, Arne O.

Journal:

Protein Engineering Design and Selection

Year:

1995

Language:

english

File:

PDF, 2.30 MB

english, 1995

34

Effects of salt on the kinetics and thermodynamic stability of endonuclease I from Vibrio salmonicida and Vibrio cholerae

Laila Niiranen, Bjørn Altermark, Bjørn O. Brandsdal, Hanna-Kirsti S. Leiros, Ronny Helland, Arne O. Smalås, Nils P. Willassen

Journal:

Year:

2008

Language:

english

File:

PDF, 464 KB

english, 2008

35

Molecular Cloning and Characterization of Anionic and Cationic Variants of Trypsin from Atlantic Salmon

Rune Male, James B. Lorens, Arne O. Smalås, Krisna R. Torrissen

Journal:

Year:

1995

Language:

english

File:

PDF, 1.50 MB

english, 1995

36

Comparative Molecular Dynamics of Mesophilic and Psychrophilic Protein Homologues Studied by 1.2 ns Simulations

Brandsdal, Bjørn O., Heimstad, Eldbjørg S., Sylte, Ingebrigt, Smalås, Arne O.

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

1999

Language:

english

File:

PDF, 1.18 MB

english, 1999

37

The crystal structures of the complexes between bovine β-trypsin and ten P1 variants of BPTI

Ronny Helland, Jacek Otlewski, Ottar Sundheim, Michal Dadlez, Arne O Smalås

Journal:

Journal of Molecular Biology

Year:

1999

Language:

english

File:

PDF, 942 KB

english, 1999

38

Uracil-DNA N-glycosylase (UNG) from the marine, psychrophilic bacterium Vibrio salmonicida shows cold adapted features: A comparative analysis to Vibrio cholerae uracil-DNA N-glycosylase

Inger Lin Uttakleiv Ræder, Ingar Leiros, Nils Peder Willassen, Arne O. Smalås, Elin Moe

Journal:

Enzyme and Microbial Technology

Year:

2008

Language:

english

File:

PDF, 1.03 MB

english, 2008

39

Interscaffolding additivity: binding of P1 variants of bovine pancreatic trypsin inhibitor to four serine proteases

Daniel Krowarsch, Michal Dadlez, Olga Buczek, Izabela Krokoszynska, Arne O. Smalas, Jacek Otlewski

Journal:

Journal of Molecular Biology

Year:

1999

Language:

english

File:

PDF, 338 KB

english, 1999

40

Identification, cloning, and expression of uracil-DNA glycosylase from Atlantic cod (Gadus morhua): characterization and homology modeling of the cold-active catalytic domain

Olav Lanes, Ingar Leiros, Arne O. Smalås, Nils Willassen

Journal:

Year:

2002

Language:

english

File:

PDF, 463 KB

english, 2002

41

Comparative studies of endonuclease I from cold-adapted Vibrio salmonicida and mesophilic Vibrio cholerae

Bjørn Altermark, Laila Niiranen, Nils P. Willassen, Arne O. Smalås, Elin Moe

Journal:

Year:

2007

Language:

english

File:

PDF, 814 KB

english, 2007

42

High quality draft genome sequence ofStreptomyces sp.strain AW19M42 isolated from a sea squirt in Northern Norway

Bjerga, Gro Elin Kjæreng, Hjerde, Erik, De Santi, Concetta, Williamson, Adele Kim, Smalås, Arne Oskar, Willassen, Nils Peder, Altermark, Bjørn

Journal:

Standards in Genomic Sciences

Year:

2014

Language:

english

File:

PDF, 1.26 MB

english, 2014

43

Cold adaption of enzymes: Structural comparison between salmon and bovine trypsins

Arne O. Smalås, Eldbjørg S. Heimstad, Asbjørn Hordvik, Nils P. Willassen, Rune Male

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

1994

Language:

english

File:

PDF, 1.69 MB

english, 1994

44

Thermal unfolding studies of cold adapted uracil-DNA N-glycosylase (UNG) from Atlantic cod (Gadus morhua). A comparative study with human UNG

Netsanet Gizaw Assefa, Laila Niiranen, Nils Peder Willassen, Arne Smalås, Elin Moe

Journal:

Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology

Year:

2012

Language:

english

File:

PDF, 787 KB

english, 2012

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